Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm44454-201ENSMUST00000198541 138 ntBASIC17■□□□□ 0.31
Smarcd1Q61466 AC108846.1-201ENSMUST00000214531 513 ntBASIC17■□□□□ 0.31
Smarcd1Q61466 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17■□□□□ 0.31
Smarcd1Q61466 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd1Q61466 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smarcd1Q61466 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd1Q61466 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd1Q61466 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd1Q61466 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17■□□□□ 0.31
Smarcd1Q61466 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcd1Q61466 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smarcd1Q61466 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Gm7153-201ENSMUST00000117092 455 ntBASIC16.99■□□□□ 0.31
Smarcd1Q61466 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.99■□□□□ 0.31
Smarcd1Q61466 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Smarcd1Q61466 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcd1Q61466 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd1Q61466 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd1Q61466 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Smarcd1Q61466 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd1Q61466 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd1Q61466 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd1Q61466 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd1Q61466 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd1Q61466 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd1Q61466 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd1Q61466 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smarcd1Q61466 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcd1Q61466 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smarcd1Q61466 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Gm27741-201ENSMUST00000185060 237 ntBASIC16.97■□□□□ 0.31
Smarcd1Q61466 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
Smarcd1Q61466 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.97■□□□□ 0.31
Smarcd1Q61466 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Smarcd1Q61466 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd1Q61466 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd1Q61466 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd1Q61466 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd1Q61466 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd1Q61466 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd1Q61466 Gm15165-201ENSMUST00000118140 502 ntBASIC16.96■□□□□ 0.31
Smarcd1Q61466 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.96■□□□□ 0.31
Smarcd1Q61466 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd1Q61466 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.96■□□□□ 0.31
Smarcd1Q61466 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Smarcd1Q61466 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Smarcd1Q61466 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Smarcd1Q61466 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.95■□□□□ 0.3
Smarcd1Q61466 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Gm24589-201ENSMUST00000116692 94 ntBASIC16.95■□□□□ 0.3
Smarcd1Q61466 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Gm34391-201ENSMUST00000203706 907 ntBASIC16.95■□□□□ 0.3
Smarcd1Q61466 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.95■□□□□ 0.3
Smarcd1Q61466 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smarcd1Q61466 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms