Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.03□□□□□ -0.16
Clns1aQ61189 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clns1aQ61189 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Clns1aQ61189 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Clns1aQ61189 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Clns1aQ61189 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Clns1aQ61189 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.02□□□□□ -0.16
Clns1aQ61189 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clns1aQ61189 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clns1aQ61189 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.02□□□□□ -0.16
Clns1aQ61189 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Clns1aQ61189 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clns1aQ61189 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clns1aQ61189 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Clns1aQ61189 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Clns1aQ61189 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clns1aQ61189 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Clns1aQ61189 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Clns1aQ61189 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.02□□□□□ -0.17
Clns1aQ61189 Gm26524-201ENSMUST00000192339 390 ntBASIC14.02□□□□□ -0.17
Clns1aQ61189 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Clns1aQ61189 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clns1aQ61189 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clns1aQ61189 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clns1aQ61189 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.01□□□□□ -0.17
Clns1aQ61189 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Clns1aQ61189 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.01□□□□□ -0.17
Clns1aQ61189 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clns1aQ61189 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clns1aQ61189 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clns1aQ61189 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Clns1aQ61189 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clns1aQ61189 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14□□□□□ -0.17
Clns1aQ61189 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clns1aQ61189 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clns1aQ61189 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clns1aQ61189 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clns1aQ61189 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clns1aQ61189 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clns1aQ61189 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14□□□□□ -0.17
Clns1aQ61189 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14□□□□□ -0.17
Clns1aQ61189 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14□□□□□ -0.17
Clns1aQ61189 Gm4974-201ENSMUST00000209974 875 ntBASIC14□□□□□ -0.17
Clns1aQ61189 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clns1aQ61189 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14□□□□□ -0.17
Clns1aQ61189 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clns1aQ61189 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clns1aQ61189 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Clns1aQ61189 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clns1aQ61189 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clns1aQ61189 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms