Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ClpbQ60649 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ClpbQ60649 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ClpbQ60649 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Gm14859-201ENSMUST00000117752 357 ntBASIC15.68■□□□□ 0.1
ClpbQ60649 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
ClpbQ60649 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.68■□□□□ 0.1
ClpbQ60649 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ClpbQ60649 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ClpbQ60649 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
ClpbQ60649 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ClpbQ60649 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClpbQ60649 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClpbQ60649 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClpbQ60649 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ClpbQ60649 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.67■□□□□ 0.1
ClpbQ60649 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClpbQ60649 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ClpbQ60649 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.67■□□□□ 0.1
ClpbQ60649 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.67■□□□□ 0.1
ClpbQ60649 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClpbQ60649 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ClpbQ60649 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ClpbQ60649 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ClpbQ60649 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ClpbQ60649 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.67■□□□□ 0.1
ClpbQ60649 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ClpbQ60649 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.66■□□□□ 0.1
ClpbQ60649 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.66■□□□□ 0.1
ClpbQ60649 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Gm37722-201ENSMUST00000193757 208 ntBASIC15.66■□□□□ 0.1
ClpbQ60649 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.66■□□□□ 0.1
ClpbQ60649 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ClpbQ60649 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ClpbQ60649 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.66■□□□□ 0.1
ClpbQ60649 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ClpbQ60649 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.65■□□□□ 0.1
ClpbQ60649 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ClpbQ60649 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.65■□□□□ 0.1
ClpbQ60649 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.65■□□□□ 0.1
ClpbQ60649 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.65■□□□□ 0.1
ClpbQ60649 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ClpbQ60649 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ClpbQ60649 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms