Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atp13a4Q5XF90 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Gm25016-201ENSMUST00000158399 131 ntBASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Gm17808-201ENSMUST00000200859 894 ntBASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Atp13a4Q5XF90 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Atp13a4Q5XF90 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Atp13a4Q5XF90 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Gm11950-201ENSMUST00000121615 838 ntBASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Atp13a4Q5XF90 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Atp13a4Q5XF90 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms