Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Asic1-205ENSMUST00000228185 1818 ntBASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Mir6982-201ENSMUST00000184354 68 ntBASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Gm4974-201ENSMUST00000209974 875 ntBASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tsr1Q5SWD9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Gm37055-201ENSMUST00000191866 133 ntBASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsr1Q5SWD9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Gm43930-201ENSMUST00000203868 845 ntBASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Tsr1Q5SWD9 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Gm17661-201ENSMUST00000170317 270 ntBASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tsr1Q5SWD9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms