Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav3-1Q5R1I8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Gm6821-201ENSMUST00000107540 542 ntBASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav3-1Q5R1I8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav3-1Q5R1I8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Gm7143-201ENSMUST00000222811 859 ntBASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav3-1Q5R1I8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav3-1Q5R1I8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms