Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Gm5417-201ENSMUST00000079706 384 ntBASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7-2Q5R1I3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Gm18958-201ENSMUST00000174258 762 ntBASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Gm37055-201ENSMUST00000191866 133 ntBASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav7-2Q5R1I3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Gm7791-201ENSMUST00000219066 539 ntBASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-2Q5R1I3 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Gm30025-201ENSMUST00000218555 728 ntBASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-2Q5R1I3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms