Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Gm16061-201ENSMUST00000122167 857 ntBASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-3Q5R1E6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Gm18421-201ENSMUST00000204122 625 ntBASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-3Q5R1E6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Gm22240-201ENSMUST00000175225 82 ntBASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Gm2274-201ENSMUST00000184539 609 ntBASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Gm36967-201ENSMUST00000193814 266 ntBASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-3Q5R1E6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.09□□□□□ -0.31
Trav6-3Q5R1E6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-3Q5R1E6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-3Q5R1E6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-3Q5R1E6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-3Q5R1E6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-3Q5R1E6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-3Q5R1E6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-3Q5R1E6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-3Q5R1E6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Trav6-3Q5R1E6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6-3Q5R1E6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav6-3Q5R1E6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms