Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Gm13418-201ENSMUST00000119097 944 ntBASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rnf43Q5NCP0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Gm15467-201ENSMUST00000120582 445 ntBASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf43Q5NCP0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf43Q5NCP0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf43Q5NCP0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf43Q5NCP0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf43Q5NCP0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.58■□□□□ 0.24
Rnf43Q5NCP0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf43Q5NCP0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf43Q5NCP0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rnf43Q5NCP0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf43Q5NCP0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf43Q5NCP0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf43Q5NCP0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf43Q5NCP0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rnf43Q5NCP0 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Gm7506-201ENSMUST00000207758 815 ntBASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.56■□□□□ 0.24
Rnf43Q5NCP0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms