Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf20Q5DTM8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Rnf20Q5DTM8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Gm36967-201ENSMUST00000193814 266 ntBASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.44■□□□□ 0.7
Rnf20Q5DTM8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Gm10231-201ENSMUST00000181584 441 ntBASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Gm10175-202ENSMUST00000208752 441 ntBASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rnf20Q5DTM8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rnf20Q5DTM8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms