Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf38aQ4FK66 Ddx41-204ENSMUST00000224765 2199 ntBASIC19■□□□□ 0.63
Prpf38aQ4FK66 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Gm8839-201ENSMUST00000121279 1645 ntBASIC19■□□□□ 0.63
Prpf38aQ4FK66 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Gm6376-201ENSMUST00000209407 580 ntBASIC19■□□□□ 0.63
Prpf38aQ4FK66 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19■□□□□ 0.63
Prpf38aQ4FK66 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf38aQ4FK66 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Gm44357-201ENSMUST00000195897 142 ntBASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Gm19658-201ENSMUST00000196231 138 ntBASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Gm44367-201ENSMUST00000196836 138 ntBASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Gm44350-201ENSMUST00000197197 138 ntBASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Gm44390-201ENSMUST00000197533 144 ntBASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Gm44313-201ENSMUST00000198018 138 ntBASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Gm44486-201ENSMUST00000198508 138 ntBASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Gm44314-201ENSMUST00000199263 138 ntBASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Gm44394-201ENSMUST00000199558 138 ntBASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Gm44484-201ENSMUST00000199873 138 ntBASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Gm44466-201ENSMUST00000200264 138 ntBASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Gm44359-201ENSMUST00000200671 138 ntBASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf38aQ4FK66 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Gm18195-201ENSMUST00000207604 706 ntBASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Gm7506-201ENSMUST00000207758 815 ntBASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38aQ4FK66 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Gm7862-201ENSMUST00000121461 292 ntBASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38aQ4FK66 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms