Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rnf223Q3UV31 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Gm13216-201ENSMUST00000117145 591 ntBASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Gm11452-201ENSMUST00000122376 690 ntBASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rnf223Q3UV31 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Gm25745-201ENSMUST00000174945 133 ntBASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rnf223Q3UV31 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rnf223Q3UV31 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Mzt1-203ENSMUST00000227948 952 ntBASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rnf223Q3UV31 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf223Q3UV31 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf223Q3UV31 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf223Q3UV31 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf223Q3UV31 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf223Q3UV31 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rnf223Q3UV31 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.76■□□□□ 0.11
Rnf223Q3UV31 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf223Q3UV31 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.76■□□□□ 0.11
Rnf223Q3UV31 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rnf223Q3UV31 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms