Protein–RNA interactions for Protein: Q3UQU0

Brd9, Bromodomain-containing protein 9, mousemouse

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd9Q3UQU0 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.21■□□□□ 0.51
Brd9Q3UQU0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.21■□□□□ 0.51
Brd9Q3UQU0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Brd9Q3UQU0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Brd9Q3UQU0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Brd9Q3UQU0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Brd9Q3UQU0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Brd9Q3UQU0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
Brd9Q3UQU0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Brd9Q3UQU0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Gm7862-201ENSMUST00000121461 292 ntBASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Gm25406-201ENSMUST00000157599 105 ntBASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Mir6404-201ENSMUST00000183699 94 ntBASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Brd9Q3UQU0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Brd9Q3UQU0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.18■□□□□ 0.5
Brd9Q3UQU0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Gm18195-201ENSMUST00000207604 706 ntBASIC18.17■□□□□ 0.5
Brd9Q3UQU0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Brd9Q3UQU0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Brd9Q3UQU0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Brd9Q3UQU0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms