Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cks1brtQ3UNC9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cks1brtQ3UNC9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.83□□□□□ -0.51
Cks1brtQ3UNC9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC11.83□□□□□ -0.52
Cks1brtQ3UNC9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Gm12251-201ENSMUST00000117893 792 ntBASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cks1brtQ3UNC9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Gm5812-201ENSMUST00000061073 957 ntBASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Cap2-205ENSMUST00000225824 1634 ntBASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cks1brtQ3UNC9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms