Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U1D9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U1D9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U1D9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U1D9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U1D9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U1D9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U1D9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.16□□□□□ -0.14
Q3U1D9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.16□□□□□ -0.14
Q3U1D9 Gm13884-201ENSMUST00000118103 829 ntBASIC14.16□□□□□ -0.14
Q3U1D9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.16□□□□□ -0.14
Q3U1D9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.16□□□□□ -0.14
Q3U1D9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.16□□□□□ -0.14
Q3U1D9 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.16□□□□□ -0.14
Q3U1D9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U1D9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U1D9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U1D9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Q3U1D9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U1D9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Q3U1D9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.16□□□□□ -0.14
Q3U1D9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U1D9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q3U1D9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Q3U1D9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Q3U1D9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.15□□□□□ -0.14
Q3U1D9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Q3U1D9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.15□□□□□ -0.14
Q3U1D9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.15□□□□□ -0.14
Q3U1D9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Q3U1D9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Q3U1D9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Q3U1D9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.14□□□□□ -0.15
Q3U1D9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3U1D9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3U1D9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Q3U1D9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3U1D9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Q3U1D9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Q3U1D9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3U1D9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3U1D9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Q3U1D9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Q3U1D9 Gm27867-201ENSMUST00000184778 125 ntBASIC14.14□□□□□ -0.15
Q3U1D9 Gm18195-201ENSMUST00000207604 706 ntBASIC14.14□□□□□ -0.15
Q3U1D9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.14□□□□□ -0.15
Q3U1D9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3U1D9 Rps4l-201ENSMUST00000071745 943 ntBASIC14.14□□□□□ -0.15
Q3U1D9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3U1D9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3U1D9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3U1D9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Q3U1D9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3U1D9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Q3U1D9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.13□□□□□ -0.15
Q3U1D9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Q3U1D9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Q3U1D9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.13□□□□□ -0.15
Q3U1D9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.13□□□□□ -0.15
Q3U1D9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Q3U1D9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.13□□□□□ -0.15
Q3U1D9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.13□□□□□ -0.15
Q3U1D9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Q3U1D9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms