Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cul4aQ3TCH7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.16■□□□□ 0.34
Cul4aQ3TCH7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Gm29707-201ENSMUST00000196325 491 ntBASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cul4aQ3TCH7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Cul4aQ3TCH7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cul4aQ3TCH7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Gm16061-201ENSMUST00000122167 857 ntBASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Gm13474-201ENSMUST00000122466 815 ntBASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Gm10566-201ENSMUST00000086739 996 ntBASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cul4aQ3TCH7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Cul4aQ3TCH7 Gm22240-201ENSMUST00000175225 82 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms