Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Gm15236-201ENSMUST00000117309 379 ntBASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 CT030684.1-201ENSMUST00000227292 914 ntBASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Ush2AQ2QI47 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Gm25144-201ENSMUST00000179561 110 ntBASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Gm25352-201ENSMUST00000179815 110 ntBASIC8.68□□□□□ -1.02
Ush2AQ2QI47 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC8.68□□□□□ -1.02
Ush2AQ2QI47 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Gm6263-201ENSMUST00000120029 1342 ntBASIC8.68□□□□□ -1.02
Ush2AQ2QI47 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Gm27680-201ENSMUST00000184192 160 ntBASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Gm37466-201ENSMUST00000195692 652 ntBASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Gm15198-201ENSMUST00000117283 177 ntBASIC8.68□□□□□ -1.02
Ush2AQ2QI47 AC154171.1-201ENSMUST00000224610 643 ntBASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Fst-202ENSMUST00000223640 2612 ntBASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Grk6-206ENSMUST00000224995 2971 ntBASIC8.68□□□□□ -1.02
Ush2AQ2QI47 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Ighv5-13-201ENSMUST00000193550 290 ntBASIC8.68□□□□□ -1.02
Ush2AQ2QI47 CT009713.10-202ENSMUST00000225734 696 ntBASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Ush2AQ2QI47 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Gm14042-201ENSMUST00000120139 833 ntBASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Gm28630-201ENSMUST00000187806 498 ntBASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Gm45141-201ENSMUST00000206502 1888 ntBASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Gm45668-201ENSMUST00000211271 493 ntBASIC8.67□□□□□ -1.02
Ush2AQ2QI47 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Gm9172-201ENSMUST00000212092 954 ntBASIC8.67□□□□□ -1.02
Ush2AQ2QI47 AC114585.2-202ENSMUST00000228094 426 ntBASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ush2AQ2QI47 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Gm13517-201ENSMUST00000120782 1495 ntBASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Gm45906-201ENSMUST00000208911 1430 ntBASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Gm29541-201ENSMUST00000191351 678 ntBASIC8.66□□□□□ -1.02
Ush2AQ2QI47 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms