Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna5Q2MKA5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna5Q2MKA5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna5Q2MKA5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Chrna5Q2MKA5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna5Q2MKA5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna5Q2MKA5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.34■□□□□ 0.69
Chrna5Q2MKA5 Gm45167-201ENSMUST00000208007 322 ntBASIC19.34■□□□□ 0.69
Chrna5Q2MKA5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna5Q2MKA5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna5Q2MKA5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Chrna5Q2MKA5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna5Q2MKA5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna5Q2MKA5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna5Q2MKA5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Chrna5Q2MKA5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Chrna5Q2MKA5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna5Q2MKA5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna5Q2MKA5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna5Q2MKA5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna5Q2MKA5 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.33■□□□□ 0.68
Chrna5Q2MKA5 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna5Q2MKA5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Chrna5Q2MKA5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Chrna5Q2MKA5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Chrna5Q2MKA5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna5Q2MKA5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.33■□□□□ 0.68
Chrna5Q2MKA5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna5Q2MKA5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna5Q2MKA5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna5Q2MKA5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna5Q2MKA5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna5Q2MKA5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna5Q2MKA5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna5Q2MKA5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Mir6404-201ENSMUST00000183699 94 ntBASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna5Q2MKA5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 Gm27300-201ENSMUST00000184085 97 ntBASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 Gm27335-201ENSMUST00000184758 97 ntBASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.31■□□□□ 0.68
Chrna5Q2MKA5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Gm11764-201ENSMUST00000120221 623 ntBASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Gm4899-201ENSMUST00000178708 719 ntBASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.3■□□□□ 0.68
Chrna5Q2MKA5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms