Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Gm43474-201ENSMUST00000196415 774 ntBASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col19a1Q0VF58 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Col19a1Q0VF58 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col19a1Q0VF58 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Gm22175-201ENSMUST00000175007 78 ntBASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Mir6977-201ENSMUST00000184960 64 ntBASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Gm45612-201ENSMUST00000211320 160 ntBASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col19a1Q0VF58 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Gm15427-201ENSMUST00000117288 531 ntBASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col19a1Q0VF58 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col19a1Q0VF58 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col19a1Q0VF58 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col19a1Q0VF58 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col19a1Q0VF58 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col19a1Q0VF58 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col19a1Q0VF58 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Mir6990-201ENSMUST00000183724 91 ntBASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Gm36967-201ENSMUST00000193814 266 ntBASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col19a1Q0VF58 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Col19a1Q0VF58 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms