Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Thbs3Q05895 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thbs3Q05895 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Thbs3Q05895 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thbs3Q05895 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thbs3Q05895 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thbs3Q05895 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thbs3Q05895 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thbs3Q05895 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thbs3Q05895 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.34□□□□□ -0.11
Thbs3Q05895 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Thbs3Q05895 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thbs3Q05895 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thbs3Q05895 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thbs3Q05895 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Thbs3Q05895 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Thbs3Q05895 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Thbs3Q05895 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Thbs3Q05895 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Thbs3Q05895 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 Gm11950-201ENSMUST00000121615 838 ntBASIC14.33□□□□□ -0.12
Thbs3Q05895 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.33□□□□□ -0.12
Thbs3Q05895 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Thbs3Q05895 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Thbs3Q05895 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Thbs3Q05895 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Thbs3Q05895 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs3Q05895 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Thbs3Q05895 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs3Q05895 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.32□□□□□ -0.12
Thbs3Q05895 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs3Q05895 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Thbs3Q05895 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs3Q05895 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs3Q05895 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Thbs3Q05895 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs3Q05895 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs3Q05895 Gm10052-201ENSMUST00000168019 960 ntBASIC14.32□□□□□ -0.12
Thbs3Q05895 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Thbs3Q05895 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs3Q05895 Gm7729-201ENSMUST00000050143 801 ntBASIC14.32□□□□□ -0.12
Thbs3Q05895 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs3Q05895 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Thbs3Q05895 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.32□□□□□ -0.12
Thbs3Q05895 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs3Q05895 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs3Q05895 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Thbs3Q05895 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs3Q05895 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs3Q05895 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Thbs3Q05895 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Thbs3Q05895 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Thbs3Q05895 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Thbs3Q05895 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Gm6345-202ENSMUST00000180900 204 ntBASIC14.31□□□□□ -0.12
Thbs3Q05895 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Gm29518-201ENSMUST00000190858 372 ntBASIC14.31□□□□□ -0.12
Thbs3Q05895 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.31□□□□□ -0.12
Thbs3Q05895 Gm17808-201ENSMUST00000200859 894 ntBASIC14.31□□□□□ -0.12
Thbs3Q05895 Gm44430-201ENSMUST00000203376 995 ntBASIC14.31□□□□□ -0.12
Thbs3Q05895 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Thbs3Q05895 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Thbs3Q05895 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Thbs3Q05895 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Thbs3Q05895 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms