Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smn1P97801 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.04□□□□□ -0.16
Smn1P97801 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.04□□□□□ -0.16
Smn1P97801 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smn1P97801 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smn1P97801 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smn1P97801 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smn1P97801 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.03□□□□□ -0.16
Smn1P97801 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.03□□□□□ -0.16
Smn1P97801 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smn1P97801 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Smn1P97801 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smn1P97801 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.02□□□□□ -0.16
Smn1P97801 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smn1P97801 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smn1P97801 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smn1P97801 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.02□□□□□ -0.16
Smn1P97801 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smn1P97801 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.02□□□□□ -0.16
Smn1P97801 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smn1P97801 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smn1P97801 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Smn1P97801 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smn1P97801 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smn1P97801 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.02□□□□□ -0.16
Smn1P97801 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Smn1P97801 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smn1P97801 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smn1P97801 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Smn1P97801 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Gm7638-201ENSMUST00000121348 967 ntBASIC14.02□□□□□ -0.17
Smn1P97801 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.02□□□□□ -0.17
Smn1P97801 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smn1P97801 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smn1P97801 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.01□□□□□ -0.17
Smn1P97801 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smn1P97801 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smn1P97801 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Smn1P97801 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smn1P97801 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smn1P97801 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.01□□□□□ -0.17
Smn1P97801 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smn1P97801 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smn1P97801 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smn1P97801 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smn1P97801 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms