Protein–RNA interactions for Protein: P97357

Taf1a, TATA box-binding protein-associated factor RNA polymerase I subunit A, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1aP97357 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Taf1aP97357 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf1aP97357 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf1aP97357 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf1aP97357 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf1aP97357 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Taf1aP97357 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf1aP97357 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Taf1aP97357 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Taf1aP97357 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Taf1aP97357 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Taf1aP97357 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Taf1aP97357 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf1aP97357 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Taf1aP97357 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Taf1aP97357 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf1aP97357 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Taf1aP97357 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.11■□□□□ 0.01
Taf1aP97357 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Taf1aP97357 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.11■□□□□ 0.01
Taf1aP97357 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.11■□□□□ 0.01
Taf1aP97357 Gm7791-201ENSMUST00000219066 539 ntBASIC15.11■□□□□ 0.01
Taf1aP97357 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Taf1aP97357 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Taf1aP97357 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.1■□□□□ 0.01
Taf1aP97357 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Taf1aP97357 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Taf1aP97357 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.1■□□□□ 0.01
Taf1aP97357 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Taf1aP97357 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Taf1aP97357 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.1■□□□□ 0.01
Taf1aP97357 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Taf1aP97357 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Taf1aP97357 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Taf1aP97357 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.1■□□□□ 0.01
Taf1aP97357 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Taf1aP97357 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Taf1aP97357 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.09■□□□□ 0.01
Taf1aP97357 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.09■□□□□ 0.01
Taf1aP97357 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.09■□□□□ 0.01
Taf1aP97357 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.09■□□□□ 0.01
Taf1aP97357 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.09■□□□□ 0.01
Taf1aP97357 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Taf1aP97357 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Taf1aP97357 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.09■□□□□ 0.01
Taf1aP97357 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Taf1aP97357 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.08■□□□□ 0.01
Taf1aP97357 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms