Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43bP86448 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43bP86448 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43bP86448 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43bP86448 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43bP86448 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim43bP86448 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Trim43bP86448 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim43bP86448 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim43bP86448 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim43bP86448 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim43bP86448 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim43bP86448 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 Gm7889-201ENSMUST00000185591 958 ntBASIC16.82■□□□□ 0.28
Trim43bP86448 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.82■□□□□ 0.28
Trim43bP86448 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim43bP86448 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim43bP86448 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim43bP86448 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim43bP86448 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim43bP86448 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Trim43bP86448 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Gm45058-201ENSMUST00000205810 766 ntBASIC16.81■□□□□ 0.28
Trim43bP86448 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trim43bP86448 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim43bP86448 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim43bP86448 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim43bP86448 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim43bP86448 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trim43bP86448 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trim43bP86448 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43bP86448 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim43bP86448 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43bP86448 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.8■□□□□ 0.28
Trim43bP86448 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43bP86448 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.8■□□□□ 0.28
Trim43bP86448 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Trim43bP86448 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43bP86448 Gm13474-201ENSMUST00000122466 815 ntBASIC16.8■□□□□ 0.28
Trim43bP86448 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim43bP86448 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.8■□□□□ 0.28
Trim43bP86448 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trim43bP86448 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43bP86448 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Trim43bP86448 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43bP86448 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43bP86448 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43bP86448 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43bP86448 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43bP86448 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Trim43bP86448 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43bP86448 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43bP86448 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43bP86448 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim43bP86448 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43bP86448 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43bP86448 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43bP86448 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trim43bP86448 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim43bP86448 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim43bP86448 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43bP86448 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43bP86448 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43bP86448 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43bP86448 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim43bP86448 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43bP86448 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43bP86448 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim43bP86448 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim43bP86448 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.79■□□□□ 0.28
Trim43bP86448 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms