Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ThraP63058 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.53■□□□□ 0.24
ThraP63058 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ThraP63058 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ThraP63058 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ThraP63058 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.52■□□□□ 0.24
ThraP63058 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ThraP63058 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ThraP63058 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ThraP63058 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ThraP63058 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.52■□□□□ 0.24
ThraP63058 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.52■□□□□ 0.24
ThraP63058 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.52■□□□□ 0.24
ThraP63058 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ThraP63058 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ThraP63058 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.52■□□□□ 0.24
ThraP63058 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.52■□□□□ 0.24
ThraP63058 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ThraP63058 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ThraP63058 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ThraP63058 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ThraP63058 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ThraP63058 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ThraP63058 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ThraP63058 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ThraP63058 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ThraP63058 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ThraP63058 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
ThraP63058 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.51■□□□□ 0.23
ThraP63058 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
ThraP63058 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ThraP63058 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ThraP63058 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.51■□□□□ 0.23
ThraP63058 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.51■□□□□ 0.23
ThraP63058 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ThraP63058 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.51■□□□□ 0.23
ThraP63058 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ThraP63058 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ThraP63058 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.5■□□□□ 0.23
ThraP63058 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ThraP63058 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.5■□□□□ 0.23
ThraP63058 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
ThraP63058 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ThraP63058 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ThraP63058 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ThraP63058 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.5■□□□□ 0.23
ThraP63058 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.5■□□□□ 0.23
ThraP63058 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ThraP63058 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms