Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.72□□□□□ -0.37
Pfn1P62962 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Pfn1P62962 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Gm11927-201ENSMUST00000118472 759 ntBASIC12.72□□□□□ -0.37
Pfn1P62962 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Mir6349-201ENSMUST00000184059 97 ntBASIC12.72□□□□□ -0.37
Pfn1P62962 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pfn1P62962 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pfn1P62962 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfn1P62962 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.71□□□□□ -0.37
Pfn1P62962 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.71□□□□□ -0.37
Pfn1P62962 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.71□□□□□ -0.37
Pfn1P62962 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Gm26524-201ENSMUST00000192339 390 ntBASIC12.71□□□□□ -0.37
Pfn1P62962 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfn1P62962 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfn1P62962 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfn1P62962 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfn1P62962 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pfn1P62962 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pfn1P62962 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.7□□□□□ -0.38
Pfn1P62962 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pfn1P62962 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pfn1P62962 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Pfn1P62962 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Pfn1P62962 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.7□□□□□ -0.38
Pfn1P62962 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.7□□□□□ -0.38
Pfn1P62962 Rab3c-203ENSMUST00000224180 967 ntBASIC12.7□□□□□ -0.38
Pfn1P62962 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Pfn1P62962 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfn1P62962 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.7□□□□□ -0.38
Pfn1P62962 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfn1P62962 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfn1P62962 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pfn1P62962 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfn1P62962 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfn1P62962 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.69□□□□□ -0.38
Pfn1P62962 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pfn1P62962 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.69□□□□□ -0.38
Pfn1P62962 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pfn1P62962 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfn1P62962 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pfn1P62962 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.69□□□□□ -0.38
Pfn1P62962 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfn1P62962 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfn1P62962 Gm18284-201ENSMUST00000172604 624 ntBASIC12.69□□□□□ -0.38
Pfn1P62962 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.69□□□□□ -0.38
Pfn1P62962 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.69□□□□□ -0.38
Pfn1P62962 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pfn1P62962 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfn1P62962 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pfn1P62962 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.69□□□□□ -0.38
Pfn1P62962 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pfn1P62962 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms