Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm5P62322 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm5P62322 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lsm5P62322 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.69□□□□□ -0.22
Lsm5P62322 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm5P62322 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm5P62322 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Lsm5P62322 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.68□□□□□ -0.22
Lsm5P62322 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.68□□□□□ -0.22
Lsm5P62322 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Mir6349-201ENSMUST00000184059 97 ntBASIC13.68□□□□□ -0.22
Lsm5P62322 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.68□□□□□ -0.22
Lsm5P62322 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lsm5P62322 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Lsm5P62322 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Lsm5P62322 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm5P62322 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.68□□□□□ -0.22
Lsm5P62322 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.67□□□□□ -0.22
Lsm5P62322 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Lsm5P62322 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.67□□□□□ -0.22
Lsm5P62322 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.67□□□□□ -0.22
Lsm5P62322 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.67□□□□□ -0.22
Lsm5P62322 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.67□□□□□ -0.22
Lsm5P62322 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Gm10493-201ENSMUST00000097270 612 ntBASIC13.67□□□□□ -0.22
Lsm5P62322 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.67□□□□□ -0.22
Lsm5P62322 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Lsm5P62322 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.67□□□□□ -0.22
Lsm5P62322 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Lsm5P62322 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm5P62322 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.66□□□□□ -0.22
Lsm5P62322 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Lsm5P62322 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lsm5P62322 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Lsm5P62322 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.66□□□□□ -0.22
Lsm5P62322 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Lsm5P62322 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lsm5P62322 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lsm5P62322 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lsm5P62322 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lsm5P62322 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.66□□□□□ -0.22
Lsm5P62322 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lsm5P62322 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.65□□□□□ -0.22
Lsm5P62322 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lsm5P62322 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Lsm5P62322 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lsm5P62322 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms