Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.33□□□□□ -0.12
Lsm6P62313 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.33□□□□□ -0.12
Lsm6P62313 Gm37722-201ENSMUST00000193757 208 ntBASIC14.33□□□□□ -0.12
Lsm6P62313 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm6P62313 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm6P62313 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm6P62313 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm6P62313 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.33□□□□□ -0.12
Lsm6P62313 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm6P62313 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.32□□□□□ -0.12
Lsm6P62313 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.32□□□□□ -0.12
Lsm6P62313 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lsm6P62313 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lsm6P62313 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.32□□□□□ -0.12
Lsm6P62313 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.32□□□□□ -0.12
Lsm6P62313 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.32□□□□□ -0.12
Lsm6P62313 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lsm6P62313 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.32□□□□□ -0.12
Lsm6P62313 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lsm6P62313 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Lsm6P62313 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm6P62313 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Lsm6P62313 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Lsm6P62313 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.31□□□□□ -0.12
Lsm6P62313 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.31□□□□□ -0.12
Lsm6P62313 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Lsm6P62313 Gm10013-201ENSMUST00000106074 672 ntBASIC14.31□□□□□ -0.12
Lsm6P62313 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.31□□□□□ -0.12
Lsm6P62313 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.31□□□□□ -0.12
Lsm6P62313 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.31□□□□□ -0.12
Lsm6P62313 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.31□□□□□ -0.12
Lsm6P62313 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Lsm6P62313 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Gm9987-201ENSMUST00000069768 567 ntBASIC14.31□□□□□ -0.12
Lsm6P62313 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lsm6P62313 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lsm6P62313 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lsm6P62313 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.31□□□□□ -0.12
Lsm6P62313 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.31□□□□□ -0.12
Lsm6P62313 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lsm6P62313 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm6P62313 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Lsm6P62313 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Lsm6P62313 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.3□□□□□ -0.12
Lsm6P62313 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.3□□□□□ -0.12
Lsm6P62313 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.3□□□□□ -0.12
Lsm6P62313 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lsm6P62313 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm6P62313 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms