Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Lrch1P62046 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.19■□□□□ 0.66
Lrch1P62046 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrch1P62046 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrch1P62046 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.19■□□□□ 0.66
Lrch1P62046 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.19■□□□□ 0.66
Lrch1P62046 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrch1P62046 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Lrch1P62046 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrch1P62046 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrch1P62046 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Lrch1P62046 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrch1P62046 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Lrch1P62046 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrch1P62046 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lrch1P62046 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.18■□□□□ 0.66
Lrch1P62046 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Gm27300-201ENSMUST00000184085 97 ntBASIC19.18■□□□□ 0.66
Lrch1P62046 Gm27335-201ENSMUST00000184758 97 ntBASIC19.18■□□□□ 0.66
Lrch1P62046 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.18■□□□□ 0.66
Lrch1P62046 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.18■□□□□ 0.66
Lrch1P62046 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.18■□□□□ 0.66
Lrch1P62046 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Lrch1P62046 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lrch1P62046 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrch1P62046 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lrch1P62046 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lrch1P62046 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrch1P62046 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrch1P62046 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrch1P62046 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrch1P62046 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.17■□□□□ 0.66
Lrch1P62046 Gm13616-201ENSMUST00000120600 222 ntBASIC19.17■□□□□ 0.66
Lrch1P62046 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Lrch1P62046 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.17■□□□□ 0.66
Lrch1P62046 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.17■□□□□ 0.66
Lrch1P62046 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Lrch1P62046 Gm18622-201ENSMUST00000219361 595 ntBASIC19.17■□□□□ 0.66
Lrch1P62046 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrch1P62046 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrch1P62046 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrch1P62046 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Lrch1P62046 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrch1P62046 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Lrch1P62046 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrch1P62046 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrch1P62046 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrch1P62046 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lrch1P62046 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.16■□□□□ 0.66
Lrch1P62046 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrch1P62046 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Lrch1P62046 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.16■□□□□ 0.66
Lrch1P62046 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrch1P62046 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.16■□□□□ 0.66
Lrch1P62046 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrch1P62046 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrch1P62046 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrch1P62046 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrch1P62046 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Lrch1P62046 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrch1P62046 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.16■□□□□ 0.66
Lrch1P62046 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lrch1P62046 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lrch1P62046 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.15■□□□□ 0.66
Lrch1P62046 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lrch1P62046 Gm36967-201ENSMUST00000193814 266 ntBASIC19.15■□□□□ 0.66
Lrch1P62046 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lrch1P62046 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lrch1P62046 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lrch1P62046 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lrch1P62046 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lrch1P62046 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lrch1P62046 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Lrch1P62046 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Lrch1P62046 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrch1P62046 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrch1P62046 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrch1P62046 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrch1P62046 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lrch1P62046 AA543401-201ENSMUST00000164248 1269 ntBASIC19.14■□□□□ 0.65
Lrch1P62046 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.14■□□□□ 0.65
Lrch1P62046 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lrch1P62046 Gm45167-201ENSMUST00000208007 322 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms