Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Lmo4P61969 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lmo4P61969 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Lmo4P61969 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Lmo4P61969 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Lmo4P61969 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Gm8097-201ENSMUST00000117903 829 ntBASIC13.17□□□□□ -0.3
Lmo4P61969 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Gm7230-201ENSMUST00000173026 815 ntBASIC13.17□□□□□ -0.3
Lmo4P61969 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.17□□□□□ -0.3
Lmo4P61969 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lmo4P61969 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.17□□□□□ -0.3
Lmo4P61969 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.17□□□□□ -0.3
Lmo4P61969 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.17□□□□□ -0.3
Lmo4P61969 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lmo4P61969 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lmo4P61969 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lmo4P61969 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lmo4P61969 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lmo4P61969 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lmo4P61969 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.16□□□□□ -0.3
Lmo4P61969 Gm11780-201ENSMUST00000136880 516 ntBASIC13.16□□□□□ -0.3
Lmo4P61969 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.16□□□□□ -0.3
Lmo4P61969 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lmo4P61969 Mir5126-201ENSMUST00000175513 77 ntBASIC13.16□□□□□ -0.3
Lmo4P61969 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lmo4P61969 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lmo4P61969 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Lmo4P61969 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lmo4P61969 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lmo4P61969 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lmo4P61969 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.16□□□□□ -0.3
Lmo4P61969 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lmo4P61969 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.16□□□□□ -0.3
Lmo4P61969 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lmo4P61969 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lmo4P61969 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.16□□□□□ -0.3
Lmo4P61969 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lmo4P61969 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.15□□□□□ -0.3
Lmo4P61969 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.15□□□□□ -0.3
Lmo4P61969 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.15□□□□□ -0.3
Lmo4P61969 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.15□□□□□ -0.3
Lmo4P61969 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Lmo4P61969 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.15□□□□□ -0.3
Lmo4P61969 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lmo4P61969 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Lmo4P61969 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lmo4P61969 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Lmo4P61969 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Lmo4P61969 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lmo4P61969 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.14□□□□□ -0.31
Lmo4P61969 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lmo4P61969 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lmo4P61969 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lmo4P61969 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lmo4P61969 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lmo4P61969 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Lmo4P61969 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lmo4P61969 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lmo4P61969 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lmo4P61969 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lmo4P61969 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.14□□□□□ -0.31
Lmo4P61969 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lmo4P61969 Gm15173-201ENSMUST00000122049 433 ntBASIC13.14□□□□□ -0.31
Lmo4P61969 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.14□□□□□ -0.31
Lmo4P61969 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Lmo4P61969 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lmo4P61969 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.14□□□□□ -0.31
Lmo4P61969 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms