Protein–RNA interactions for Protein: P60824

Cirbp, Cold-inducible RNA-binding protein, mousemouse

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CirbpP60824 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12□□□□□ -0.49
CirbpP60824 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12□□□□□ -0.49
CirbpP60824 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CirbpP60824 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12□□□□□ -0.49
CirbpP60824 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CirbpP60824 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CirbpP60824 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12□□□□□ -0.49
CirbpP60824 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12□□□□□ -0.49
CirbpP60824 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CirbpP60824 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC11.99□□□□□ -0.49
CirbpP60824 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CirbpP60824 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CirbpP60824 Gm10013-201ENSMUST00000106074 672 ntBASIC11.99□□□□□ -0.49
CirbpP60824 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.99□□□□□ -0.49
CirbpP60824 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.99□□□□□ -0.49
CirbpP60824 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CirbpP60824 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CirbpP60824 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CirbpP60824 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.99□□□□□ -0.49
CirbpP60824 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.99□□□□□ -0.49
CirbpP60824 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CirbpP60824 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CirbpP60824 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CirbpP60824 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.98□□□□□ -0.49
CirbpP60824 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CirbpP60824 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CirbpP60824 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CirbpP60824 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.98□□□□□ -0.49
CirbpP60824 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.98□□□□□ -0.49
CirbpP60824 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.98□□□□□ -0.49
CirbpP60824 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC11.98□□□□□ -0.49
CirbpP60824 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CirbpP60824 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CirbpP60824 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.97□□□□□ -0.49
CirbpP60824 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
CirbpP60824 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CirbpP60824 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CirbpP60824 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms