Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Gm18421-201ENSMUST00000204122 625 ntBASIC16.69■□□□□ 0.26
Tubgcp3P58854 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tubgcp3P58854 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.68■□□□□ 0.26
Tubgcp3P58854 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.68■□□□□ 0.26
Tubgcp3P58854 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubgcp3P58854 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubgcp3P58854 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tubgcp3P58854 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.66■□□□□ 0.26
Tubgcp3P58854 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubgcp3P58854 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.65■□□□□ 0.26
Tubgcp3P58854 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Tubgcp3P58854 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Tubgcp3P58854 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubgcp3P58854 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms