Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdsp1P58466 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdsp1P58466 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdsp1P58466 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdsp1P58466 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ctdsp1P58466 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ctdsp1P58466 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Ctdsp1P58466 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.83□□□□□ -0.35
Ctdsp1P58466 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
Ctdsp1P58466 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Gm13534-201ENSMUST00000121169 513 ntBASIC12.83□□□□□ -0.36
Ctdsp1P58466 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdsp1P58466 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ctdsp1P58466 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Gm13401-201ENSMUST00000117074 291 ntBASIC12.82□□□□□ -0.36
Ctdsp1P58466 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ctdsp1P58466 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Ctdsp1P58466 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ctdsp1P58466 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.8□□□□□ -0.36
Ctdsp1P58466 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ctdsp1P58466 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.8□□□□□ -0.36
Ctdsp1P58466 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms