Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.18■□□□□ 0.34
NcanP55066 Gm27437-201ENSMUST00000183429 107 ntBASIC17.18■□□□□ 0.34
NcanP55066 Gm37153-201ENSMUST00000193637 231 ntBASIC17.18■□□□□ 0.34
NcanP55066 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.18■□□□□ 0.34
NcanP55066 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.18■□□□□ 0.34
NcanP55066 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.18■□□□□ 0.34
NcanP55066 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.18■□□□□ 0.34
NcanP55066 AC125350.2-201ENSMUST00000224737 727 ntBASIC17.18■□□□□ 0.34
NcanP55066 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NcanP55066 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NcanP55066 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NcanP55066 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NcanP55066 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NcanP55066 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NcanP55066 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NcanP55066 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NcanP55066 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NcanP55066 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.17■□□□□ 0.34
NcanP55066 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.17■□□□□ 0.34
NcanP55066 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.17■□□□□ 0.34
NcanP55066 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NcanP55066 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NcanP55066 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NcanP55066 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NcanP55066 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NcanP55066 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.17■□□□□ 0.34
NcanP55066 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NcanP55066 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NcanP55066 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NcanP55066 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NcanP55066 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NcanP55066 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NcanP55066 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NcanP55066 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.16■□□□□ 0.34
NcanP55066 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.16■□□□□ 0.34
NcanP55066 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
NcanP55066 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 Gm18187-201ENSMUST00000196476 984 ntBASIC17.16■□□□□ 0.34
NcanP55066 Gm43433-201ENSMUST00000196573 481 ntBASIC17.16■□□□□ 0.34
NcanP55066 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NcanP55066 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.16■□□□□ 0.34
NcanP55066 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NcanP55066 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NcanP55066 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NcanP55066 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NcanP55066 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NcanP55066 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NcanP55066 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NcanP55066 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NcanP55066 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NcanP55066 Gm45747-201ENSMUST00000212203 999 ntBASIC17.15■□□□□ 0.34
NcanP55066 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.15■□□□□ 0.34
NcanP55066 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.15■□□□□ 0.34
NcanP55066 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NcanP55066 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NcanP55066 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NcanP55066 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
NcanP55066 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NcanP55066 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NcanP55066 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.15■□□□□ 0.34
NcanP55066 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.15■□□□□ 0.34
NcanP55066 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NcanP55066 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NcanP55066 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NcanP55066 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NcanP55066 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NcanP55066 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NcanP55066 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NcanP55066 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NcanP55066 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.14■□□□□ 0.33
NcanP55066 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.14■□□□□ 0.33
NcanP55066 Gm11745-201ENSMUST00000121669 448 ntBASIC17.14■□□□□ 0.33
NcanP55066 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.14■□□□□ 0.33
NcanP55066 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NcanP55066 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.14■□□□□ 0.33
NcanP55066 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.14■□□□□ 0.33
NcanP55066 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NcanP55066 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NcanP55066 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.14■□□□□ 0.33
NcanP55066 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
NcanP55066 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NcanP55066 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NcanP55066 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
NcanP55066 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NcanP55066 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NcanP55066 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
NcanP55066 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms