Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.58■□□□□ 0.4
Nub1P54729 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nub1P54729 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nub1P54729 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nub1P54729 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nub1P54729 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nub1P54729 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.58■□□□□ 0.4
Nub1P54729 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nub1P54729 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nub1P54729 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nub1P54729 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Nub1P54729 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nub1P54729 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nub1P54729 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.57■□□□□ 0.4
Nub1P54729 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.57■□□□□ 0.4
Nub1P54729 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Nub1P54729 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.57■□□□□ 0.4
Nub1P54729 Gm29518-201ENSMUST00000190858 372 ntBASIC17.57■□□□□ 0.4
Nub1P54729 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Nub1P54729 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nub1P54729 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nub1P54729 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nub1P54729 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nub1P54729 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nub1P54729 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nub1P54729 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nub1P54729 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.57■□□□□ 0.4
Nub1P54729 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nub1P54729 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Nub1P54729 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Nub1P54729 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 Gm6623-201ENSMUST00000173570 544 ntBASIC17.56■□□□□ 0.4
Nub1P54729 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nub1P54729 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nub1P54729 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nub1P54729 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nub1P54729 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nub1P54729 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.55■□□□□ 0.4
Nub1P54729 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.55■□□□□ 0.4
Nub1P54729 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.55■□□□□ 0.4
Nub1P54729 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.55■□□□□ 0.4
Nub1P54729 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nub1P54729 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.55■□□□□ 0.4
Nub1P54729 Gm17808-201ENSMUST00000200859 894 ntBASIC17.55■□□□□ 0.4
Nub1P54729 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nub1P54729 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nub1P54729 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nub1P54729 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nub1P54729 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nub1P54729 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nub1P54729 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nub1P54729 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nub1P54729 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.54■□□□□ 0.4
Nub1P54729 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nub1P54729 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Nub1P54729 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nub1P54729 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nub1P54729 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nub1P54729 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nub1P54729 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nub1P54729 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nub1P54729 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nub1P54729 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms