Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdx1P52946 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pdx1P52946 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pdx1P52946 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdx1P52946 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdx1P52946 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdx1P52946 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.17■□□□□ 0.18
Pdx1P52946 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.17■□□□□ 0.18
Pdx1P52946 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.17■□□□□ 0.18
Pdx1P52946 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pdx1P52946 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Pdx1P52946 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdx1P52946 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdx1P52946 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdx1P52946 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdx1P52946 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pdx1P52946 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pdx1P52946 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pdx1P52946 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pdx1P52946 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pdx1P52946 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pdx1P52946 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Pdx1P52946 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pdx1P52946 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Pdx1P52946 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.16■□□□□ 0.18
Pdx1P52946 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.16■□□□□ 0.18
Pdx1P52946 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.16■□□□□ 0.18
Pdx1P52946 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pdx1P52946 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.16■□□□□ 0.18
Pdx1P52946 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.15■□□□□ 0.18
Pdx1P52946 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.15■□□□□ 0.18
Pdx1P52946 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.15■□□□□ 0.18
Pdx1P52946 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Gm36967-201ENSMUST00000193814 266 ntBASIC16.15■□□□□ 0.18
Pdx1P52946 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pdx1P52946 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pdx1P52946 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pdx1P52946 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.15■□□□□ 0.18
Pdx1P52946 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.14■□□□□ 0.18
Pdx1P52946 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pdx1P52946 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pdx1P52946 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.14■□□□□ 0.17
Pdx1P52946 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Pdx1P52946 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.14■□□□□ 0.17
Pdx1P52946 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.14■□□□□ 0.17
Pdx1P52946 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pdx1P52946 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pdx1P52946 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pdx1P52946 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 121.9 ms