Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.25■□□□□ 0.35
Shmt1P50431 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shmt1P50431 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shmt1P50431 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shmt1P50431 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Shmt1P50431 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shmt1P50431 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shmt1P50431 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shmt1P50431 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Shmt1P50431 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Shmt1P50431 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shmt1P50431 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shmt1P50431 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Shmt1P50431 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shmt1P50431 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.24■□□□□ 0.35
Shmt1P50431 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shmt1P50431 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shmt1P50431 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shmt1P50431 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.24■□□□□ 0.35
Shmt1P50431 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shmt1P50431 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shmt1P50431 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shmt1P50431 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shmt1P50431 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shmt1P50431 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shmt1P50431 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Shmt1P50431 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shmt1P50431 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shmt1P50431 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Shmt1P50431 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shmt1P50431 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shmt1P50431 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.23■□□□□ 0.35
Shmt1P50431 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shmt1P50431 Gm12895-201ENSMUST00000122214 226 ntBASIC17.23■□□□□ 0.35
Shmt1P50431 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.23■□□□□ 0.35
Shmt1P50431 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shmt1P50431 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Shmt1P50431 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Shmt1P50431 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shmt1P50431 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shmt1P50431 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shmt1P50431 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shmt1P50431 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shmt1P50431 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shmt1P50431 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shmt1P50431 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Shmt1P50431 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
Shmt1P50431 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.22■□□□□ 0.35
Shmt1P50431 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.22■□□□□ 0.35
Shmt1P50431 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.22■□□□□ 0.35
Shmt1P50431 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shmt1P50431 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shmt1P50431 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Shmt1P50431 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shmt1P50431 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shmt1P50431 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Shmt1P50431 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shmt1P50431 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Shmt1P50431 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shmt1P50431 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shmt1P50431 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shmt1P50431 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.21■□□□□ 0.35
Shmt1P50431 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shmt1P50431 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shmt1P50431 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Shmt1P50431 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Shmt1P50431 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
Shmt1P50431 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Shmt1P50431 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shmt1P50431 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Shmt1P50431 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shmt1P50431 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shmt1P50431 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shmt1P50431 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shmt1P50431 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shmt1P50431 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shmt1P50431 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shmt1P50431 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.2■□□□□ 0.34
Shmt1P50431 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shmt1P50431 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Shmt1P50431 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shmt1P50431 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.2■□□□□ 0.34
Shmt1P50431 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms