Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.62■□□□□ 0.09
Sox18P43680 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox18P43680 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.62■□□□□ 0.09
Sox18P43680 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox18P43680 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sox18P43680 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox18P43680 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox18P43680 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox18P43680 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
Sox18P43680 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox18P43680 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sox18P43680 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox18P43680 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sox18P43680 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox18P43680 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sox18P43680 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Sox18P43680 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.61■□□□□ 0.09
Sox18P43680 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Sox18P43680 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.61■□□□□ 0.09
Sox18P43680 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Sox18P43680 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Chchd1-203ENSMUST00000224633 557 ntBASIC15.61■□□□□ 0.09
Sox18P43680 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.61■□□□□ 0.09
Sox18P43680 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Sox18P43680 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.61■□□□□ 0.09
Sox18P43680 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sox18P43680 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.6■□□□□ 0.09
Sox18P43680 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.6■□□□□ 0.09
Sox18P43680 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.6■□□□□ 0.09
Sox18P43680 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.6■□□□□ 0.09
Sox18P43680 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.6■□□□□ 0.09
Sox18P43680 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Sox18P43680 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sox18P43680 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Sox18P43680 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Sox18P43680 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.59■□□□□ 0.09
Sox18P43680 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.59■□□□□ 0.09
Sox18P43680 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.59■□□□□ 0.09
Sox18P43680 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.59■□□□□ 0.09
Sox18P43680 Gm44872-201ENSMUST00000207864 420 ntBASIC15.59■□□□□ 0.09
Sox18P43680 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Sox18P43680 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Sox18P43680 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Sox18P43680 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Sox18P43680 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Sox18P43680 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox18P43680 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms