Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-2P42586 Gm11950-201ENSMUST00000121615 838 ntBASIC14.99□□□□□ -0.01
Nkx2-2P42586 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-2P42586 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-2P42586 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-2P42586 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Nkx2-2P42586 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.99□□□□□ -0.01
Nkx2-2P42586 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-2P42586 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.99□□□□□ -0.01
Nkx2-2P42586 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Nkx2-2P42586 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-2P42586 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nkx2-2P42586 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Nkx2-2P42586 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.98□□□□□ -0.01
Nkx2-2P42586 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.98□□□□□ -0.01
Nkx2-2P42586 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-2P42586 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-2P42586 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-2P42586 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-2P42586 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-2P42586 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.98□□□□□ -0.01
Nkx2-2P42586 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-2P42586 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.98□□□□□ -0.01
Nkx2-2P42586 Gm29518-201ENSMUST00000190858 372 ntBASIC14.98□□□□□ -0.01
Nkx2-2P42586 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.98□□□□□ -0.01
Nkx2-2P42586 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-2P42586 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-2P42586 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-2P42586 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-2P42586 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-2P42586 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nkx2-2P42586 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nkx2-2P42586 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.97□□□□□ -0.01
Nkx2-2P42586 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Gm17808-201ENSMUST00000200859 894 ntBASIC14.97□□□□□ -0.01
Nkx2-2P42586 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-2P42586 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-2P42586 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.95□□□□□ -0.02
Nkx2-2P42586 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.95□□□□□ -0.02
Nkx2-2P42586 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms