Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Sox6P40645 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.37■□□□□ 0.05
Sox6P40645 Gm9731-201ENSMUST00000209480 747 ntBASIC15.37■□□□□ 0.05
Sox6P40645 Gm30025-201ENSMUST00000218555 728 ntBASIC15.37■□□□□ 0.05
Sox6P40645 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Sox6P40645 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox6P40645 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox6P40645 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.37■□□□□ 0.05
Sox6P40645 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Sox6P40645 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Sox6P40645 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.36■□□□□ 0.05
Sox6P40645 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Gm17661-201ENSMUST00000170317 270 ntBASIC15.36■□□□□ 0.05
Sox6P40645 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.36■□□□□ 0.05
Sox6P40645 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.36■□□□□ 0.05
Sox6P40645 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sox6P40645 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Sox6P40645 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Sox6P40645 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Sox6P40645 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sox6P40645 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sox6P40645 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Sox6P40645 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.35■□□□□ 0.05
Sox6P40645 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Sox6P40645 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.35■□□□□ 0.05
Sox6P40645 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Sox6P40645 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Sox6P40645 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Sox6P40645 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.35■□□□□ 0.05
Sox6P40645 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Sox6P40645 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.35■□□□□ 0.05
Sox6P40645 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Sox6P40645 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Sox6P40645 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.35■□□□□ 0.05
Sox6P40645 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.35■□□□□ 0.05
Sox6P40645 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Sox6P40645 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sox6P40645 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.34■□□□□ 0.05
Sox6P40645 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sox6P40645 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.34■□□□□ 0.05
Sox6P40645 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.34■□□□□ 0.05
Sox6P40645 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.34■□□□□ 0.05
Sox6P40645 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sox6P40645 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Sox6P40645 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox6P40645 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Sox6P40645 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Sox6P40645 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Sox6P40645 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Sox6P40645 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sox6P40645 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sox6P40645 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Sox6P40645 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms