Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.8■□□□□ 0.28
Cxcl12P40224 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Cxcl12P40224 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl12P40224 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Cxcl12P40224 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl12P40224 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cxcl12P40224 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl12P40224 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl12P40224 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl12P40224 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.79■□□□□ 0.28
Cxcl12P40224 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.79■□□□□ 0.28
Cxcl12P40224 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.79■□□□□ 0.28
Cxcl12P40224 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.79■□□□□ 0.28
Cxcl12P40224 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.79■□□□□ 0.28
Cxcl12P40224 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Cxcl12P40224 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cxcl12P40224 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl12P40224 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.78■□□□□ 0.28
Cxcl12P40224 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Mir1895-201ENSMUST00000122615 79 ntBASIC16.78■□□□□ 0.28
Cxcl12P40224 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.78■□□□□ 0.28
Cxcl12P40224 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.78■□□□□ 0.28
Cxcl12P40224 Gm27300-201ENSMUST00000184085 97 ntBASIC16.78■□□□□ 0.28
Cxcl12P40224 Gm27335-201ENSMUST00000184758 97 ntBASIC16.78■□□□□ 0.28
Cxcl12P40224 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cxcl12P40224 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.78■□□□□ 0.28
Cxcl12P40224 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl12P40224 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl12P40224 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl12P40224 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl12P40224 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl12P40224 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cxcl12P40224 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.77■□□□□ 0.28
Cxcl12P40224 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl12P40224 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.77■□□□□ 0.28
Cxcl12P40224 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl12P40224 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl12P40224 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.77■□□□□ 0.28
Cxcl12P40224 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl12P40224 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl12P40224 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl12P40224 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl12P40224 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cxcl12P40224 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cxcl12P40224 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cxcl12P40224 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cxcl12P40224 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cxcl12P40224 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cxcl12P40224 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cxcl12P40224 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cxcl12P40224 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cxcl12P40224 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl12P40224 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl12P40224 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl12P40224 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl12P40224 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.76■□□□□ 0.27
Cxcl12P40224 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl12P40224 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.76■□□□□ 0.27
Cxcl12P40224 Gm27494-201ENSMUST00000184735 189 ntBASIC16.76■□□□□ 0.27
Cxcl12P40224 Gm44492-201ENSMUST00000197012 141 ntBASIC16.76■□□□□ 0.27
Cxcl12P40224 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.76■□□□□ 0.27
Cxcl12P40224 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl12P40224 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cxcl12P40224 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl12P40224 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl12P40224 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms