Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Timp3P39876 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Timp3P39876 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Timp3P39876 Gm13186-201ENSMUST00000118031 316 ntBASIC13.37□□□□□ -0.27
Timp3P39876 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Mir3081-201ENSMUST00000175305 84 ntBASIC13.37□□□□□ -0.27
Timp3P39876 Gm18115-201ENSMUST00000221209 621 ntBASIC13.37□□□□□ -0.27
Timp3P39876 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.37□□□□□ -0.27
Timp3P39876 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Timp3P39876 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Timp3P39876 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Timp3P39876 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Timp3P39876 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Timp3P39876 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Timp3P39876 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Timp3P39876 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.36□□□□□ -0.27
Timp3P39876 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Timp3P39876 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Timp3P39876 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.36□□□□□ -0.27
Timp3P39876 Gm11336-201ENSMUST00000118168 334 ntBASIC13.36□□□□□ -0.27
Timp3P39876 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.36□□□□□ -0.27
Timp3P39876 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Timp3P39876 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Timp3P39876 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Timp3P39876 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Timp3P39876 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Timp3P39876 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Timp3P39876 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Timp3P39876 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Gm28033-201ENSMUST00000184224 96 ntBASIC13.35□□□□□ -0.27
Timp3P39876 Gm17971-201ENSMUST00000190239 806 ntBASIC13.35□□□□□ -0.27
Timp3P39876 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.35□□□□□ -0.27
Timp3P39876 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Timp3P39876 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Timp3P39876 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.35□□□□□ -0.27
Timp3P39876 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Timp3P39876 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms