Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.1■□□□□ 0.17
HmgclP38060 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.1■□□□□ 0.17
HmgclP38060 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Gm11950-201ENSMUST00000121615 838 ntBASIC16.1■□□□□ 0.17
HmgclP38060 Gm10052-201ENSMUST00000168019 960 ntBASIC16.1■□□□□ 0.17
HmgclP38060 Gm29518-201ENSMUST00000190858 372 ntBASIC16.1■□□□□ 0.17
HmgclP38060 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Gm7729-201ENSMUST00000050143 801 ntBASIC16.1■□□□□ 0.17
HmgclP38060 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HmgclP38060 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HmgclP38060 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
HmgclP38060 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.1■□□□□ 0.17
HmgclP38060 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HmgclP38060 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HmgclP38060 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HmgclP38060 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HmgclP38060 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HmgclP38060 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
HmgclP38060 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
HmgclP38060 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HmgclP38060 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HmgclP38060 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HmgclP38060 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HmgclP38060 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HmgclP38060 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HmgclP38060 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HmgclP38060 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HmgclP38060 Gm17808-201ENSMUST00000200859 894 ntBASIC16.08■□□□□ 0.16
HmgclP38060 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HmgclP38060 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HmgclP38060 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.08■□□□□ 0.16
HmgclP38060 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HmgclP38060 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.08■□□□□ 0.16
HmgclP38060 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HmgclP38060 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HmgclP38060 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HmgclP38060 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.08■□□□□ 0.16
HmgclP38060 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HmgclP38060 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HmgclP38060 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HmgclP38060 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.07■□□□□ 0.16
HmgclP38060 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HmgclP38060 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HmgclP38060 Gm45328-201ENSMUST00000210942 917 ntBASIC16.07■□□□□ 0.16
HmgclP38060 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.07■□□□□ 0.16
HmgclP38060 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HmgclP38060 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
HmgclP38060 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HmgclP38060 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HmgclP38060 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HmgclP38060 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HmgclP38060 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
HmgclP38060 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
HmgclP38060 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.07■□□□□ 0.16
HmgclP38060 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HmgclP38060 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HmgclP38060 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HmgclP38060 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.06■□□□□ 0.16
HmgclP38060 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.06■□□□□ 0.16
HmgclP38060 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HmgclP38060 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HmgclP38060 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.06■□□□□ 0.16
HmgclP38060 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HmgclP38060 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HmgclP38060 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
HmgclP38060 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HmgclP38060 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HmgclP38060 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HmgclP38060 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HmgclP38060 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HmgclP38060 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms