Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.26■□□□□ 0.35
Rfc1P35601 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.26■□□□□ 0.35
Rfc1P35601 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.26■□□□□ 0.35
Rfc1P35601 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc1P35601 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc1P35601 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc1P35601 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc1P35601 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc1P35601 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc1P35601 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc1P35601 Gm11249-201ENSMUST00000117071 859 ntBASIC17.26■□□□□ 0.35
Rfc1P35601 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Rfc1P35601 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.26■□□□□ 0.35
Rfc1P35601 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc1P35601 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc1P35601 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc1P35601 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.26■□□□□ 0.35
Rfc1P35601 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Rfc1P35601 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfc1P35601 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rfc1P35601 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rfc1P35601 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.25■□□□□ 0.35
Rfc1P35601 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rfc1P35601 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rfc1P35601 Gm12441-201ENSMUST00000121806 588 ntBASIC17.25■□□□□ 0.35
Rfc1P35601 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Mir6349-201ENSMUST00000184059 97 ntBASIC17.25■□□□□ 0.35
Rfc1P35601 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.25■□□□□ 0.35
Rfc1P35601 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rfc1P35601 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rfc1P35601 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc1P35601 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.24■□□□□ 0.35
Rfc1P35601 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.24■□□□□ 0.35
Rfc1P35601 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rfc1P35601 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rfc1P35601 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc1P35601 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc1P35601 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rfc1P35601 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc1P35601 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc1P35601 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rfc1P35601 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc1P35601 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rfc1P35601 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc1P35601 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc1P35601 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc1P35601 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rfc1P35601 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.23■□□□□ 0.35
Rfc1P35601 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.23■□□□□ 0.35
Rfc1P35601 Gm6576-201ENSMUST00000169678 883 ntBASIC17.23■□□□□ 0.35
Rfc1P35601 Gm10138-203ENSMUST00000206952 366 ntBASIC17.23■□□□□ 0.35
Rfc1P35601 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.23■□□□□ 0.35
Rfc1P35601 Gm20049-201ENSMUST00000219950 730 ntBASIC17.23■□□□□ 0.35
Rfc1P35601 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.23■□□□□ 0.35
Rfc1P35601 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc1P35601 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc1P35601 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc1P35601 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rfc1P35601 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rfc1P35601 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc1P35601 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc1P35601 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc1P35601 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rfc1P35601 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc1P35601 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rfc1P35601 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc1P35601 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc1P35601 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc1P35601 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc1P35601 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms