Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RetP35546 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.28■□□□□ 0.04
RetP35546 Gm28659-201ENSMUST00000188013 759 ntBASIC15.28■□□□□ 0.04
RetP35546 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Gm5867-201ENSMUST00000063197 592 ntBASIC15.28■□□□□ 0.04
RetP35546 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.28■□□□□ 0.04
RetP35546 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RetP35546 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RetP35546 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RetP35546 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
RetP35546 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RetP35546 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
RetP35546 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RetP35546 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RetP35546 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RetP35546 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RetP35546 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RetP35546 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RetP35546 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RetP35546 Mir770-201ENSMUST00000103252 94 ntBASIC15.27■□□□□ 0.04
RetP35546 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RetP35546 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RetP35546 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RetP35546 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.27■□□□□ 0.04
RetP35546 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RetP35546 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RetP35546 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RetP35546 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RetP35546 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RetP35546 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RetP35546 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.27■□□□□ 0.03
RetP35546 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.27■□□□□ 0.03
RetP35546 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RetP35546 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RetP35546 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RetP35546 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.27■□□□□ 0.03
RetP35546 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RetP35546 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RetP35546 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RetP35546 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
RetP35546 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RetP35546 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RetP35546 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.26■□□□□ 0.03
RetP35546 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RetP35546 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RetP35546 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.26■□□□□ 0.03
RetP35546 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
RetP35546 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RetP35546 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RetP35546 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RetP35546 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RetP35546 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RetP35546 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RetP35546 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RetP35546 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RetP35546 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RetP35546 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RetP35546 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.25■□□□□ 0.03
RetP35546 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.25■□□□□ 0.03
RetP35546 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RetP35546 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.25■□□□□ 0.03
RetP35546 Gm37722-201ENSMUST00000193757 208 ntBASIC15.25■□□□□ 0.03
RetP35546 Gm10566-201ENSMUST00000086739 996 ntBASIC15.25■□□□□ 0.03
RetP35546 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RetP35546 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RetP35546 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RetP35546 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms