Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab5cP35278 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab5cP35278 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab5cP35278 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab5cP35278 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rab5cP35278 Gm45102-201ENSMUST00000207427 857 ntBASIC13.38□□□□□ -0.27
Rab5cP35278 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Rab5cP35278 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab5cP35278 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.38□□□□□ -0.27
Rab5cP35278 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.38□□□□□ -0.27
Rab5cP35278 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab5cP35278 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab5cP35278 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.37□□□□□ -0.27
Rab5cP35278 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Rab5cP35278 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.37□□□□□ -0.27
Rab5cP35278 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Rab5cP35278 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Rab5cP35278 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Gm11643-201ENSMUST00000119578 864 ntBASIC13.37□□□□□ -0.27
Rab5cP35278 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.37□□□□□ -0.27
Rab5cP35278 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Rab5cP35278 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rab5cP35278 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.37□□□□□ -0.27
Rab5cP35278 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab5cP35278 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rab5cP35278 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.36□□□□□ -0.27
Rab5cP35278 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rab5cP35278 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Gm9988-201ENSMUST00000069786 435 ntBASIC13.36□□□□□ -0.27
Rab5cP35278 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rab5cP35278 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rab5cP35278 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.36□□□□□ -0.27
Rab5cP35278 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.36□□□□□ -0.27
Rab5cP35278 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rab5cP35278 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Rab5cP35278 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.35□□□□□ -0.27
Rab5cP35278 Zfp783-201ENSMUST00000095946 670 ntBASIC13.35□□□□□ -0.27
Rab5cP35278 Reep4-203ENSMUST00000226563 1444 ntBASIC13.35□□□□□ -0.27
Rab5cP35278 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Rab5cP35278 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Rab5cP35278 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Rab5cP35278 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rab5cP35278 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms