Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rom1P32958 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rom1P32958 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rom1P32958 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rom1P32958 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rom1P32958 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.97□□□□□ -0.33
Rom1P32958 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rom1P32958 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rom1P32958 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.96□□□□□ -0.33
Rom1P32958 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.96□□□□□ -0.33
Rom1P32958 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rom1P32958 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rom1P32958 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Rom1P32958 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.96□□□□□ -0.33
Rom1P32958 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.96□□□□□ -0.33
Rom1P32958 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Gm10517-202ENSMUST00000192970 758 ntBASIC12.96□□□□□ -0.33
Rom1P32958 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.96□□□□□ -0.33
Rom1P32958 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rom1P32958 Gm18025-201ENSMUST00000221733 862 ntBASIC12.96□□□□□ -0.33
Rom1P32958 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rom1P32958 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.96□□□□□ -0.34
Rom1P32958 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rom1P32958 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.95□□□□□ -0.34
Rom1P32958 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rom1P32958 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Rom1P32958 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Gm12382-201ENSMUST00000122005 922 ntBASIC12.95□□□□□ -0.34
Rom1P32958 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.95□□□□□ -0.34
Rom1P32958 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rom1P32958 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.95□□□□□ -0.34
Rom1P32958 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.95□□□□□ -0.34
Rom1P32958 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rom1P32958 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rom1P32958 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.94□□□□□ -0.34
Rom1P32958 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.94□□□□□ -0.34
Rom1P32958 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.94□□□□□ -0.34
Rom1P32958 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.94□□□□□ -0.34
Rom1P32958 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rom1P32958 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Rom1P32958 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rom1P32958 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rom1P32958 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rom1P32958 Dio3-201ENSMUST00000097228 1449 ntBASIC12.94□□□□□ -0.34
Rom1P32958 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.94□□□□□ -0.34
Rom1P32958 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rom1P32958 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.93□□□□□ -0.34
Rom1P32958 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms