Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.19■□□□□ 0.02
Nedd8P29595 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Gm2399-201ENSMUST00000104944 225 ntBASIC15.19■□□□□ 0.02
Nedd8P29595 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.19■□□□□ 0.02
Nedd8P29595 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Nedd8P29595 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Nedd8P29595 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.19■□□□□ 0.02
Nedd8P29595 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nedd8P29595 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nedd8P29595 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nedd8P29595 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
Nedd8P29595 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Nedd8P29595 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nedd8P29595 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nedd8P29595 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nedd8P29595 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nedd8P29595 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nedd8P29595 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.18■□□□□ 0.02
Nedd8P29595 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.18■□□□□ 0.02
Nedd8P29595 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.18■□□□□ 0.02
Nedd8P29595 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.18■□□□□ 0.02
Nedd8P29595 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nedd8P29595 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nedd8P29595 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nedd8P29595 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nedd8P29595 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nedd8P29595 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.17■□□□□ 0.02
Nedd8P29595 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nedd8P29595 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.17■□□□□ 0.02
Nedd8P29595 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.17■□□□□ 0.02
Nedd8P29595 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.17■□□□□ 0.02
Nedd8P29595 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nedd8P29595 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nedd8P29595 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nedd8P29595 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.17■□□□□ 0.02
Nedd8P29595 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nedd8P29595 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nedd8P29595 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nedd8P29595 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nedd8P29595 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nedd8P29595 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nedd8P29595 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.16■□□□□ 0.02
Nedd8P29595 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nedd8P29595 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nedd8P29595 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Nedd8P29595 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.16■□□□□ 0.02
Nedd8P29595 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nedd8P29595 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nedd8P29595 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nedd8P29595 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nedd8P29595 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nedd8P29595 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nedd8P29595 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nedd8P29595 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Nedd8P29595 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Nedd8P29595 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.15■□□□□ 0.02
Nedd8P29595 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nedd8P29595 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms