Protein–RNA interactions for Protein: P29452

Casp1, Caspase-1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp1P29452 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Casp1P29452 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Casp1P29452 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Casp1P29452 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casp1P29452 Gm12350-201ENSMUST00000121208 462 ntBASIC19.58■□□□□ 0.72
Casp1P29452 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.58■□□□□ 0.72
Casp1P29452 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.58■□□□□ 0.72
Casp1P29452 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.58■□□□□ 0.72
Casp1P29452 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casp1P29452 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.58■□□□□ 0.72
Casp1P29452 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Casp1P29452 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casp1P29452 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
Casp1P29452 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casp1P29452 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Casp1P29452 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casp1P29452 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Casp1P29452 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Casp1P29452 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Casp1P29452 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Casp1P29452 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Casp1P29452 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casp1P29452 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Casp1P29452 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casp1P29452 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casp1P29452 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Casp1P29452 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.57■□□□□ 0.72
Casp1P29452 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.57■□□□□ 0.72
Casp1P29452 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casp1P29452 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.57■□□□□ 0.72
Casp1P29452 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casp1P29452 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Casp1P29452 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Casp1P29452 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Casp1P29452 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Casp1P29452 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Casp1P29452 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casp1P29452 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Casp1P29452 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Casp1P29452 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.56■□□□□ 0.72
Casp1P29452 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Casp1P29452 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.56■□□□□ 0.72
Casp1P29452 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Casp1P29452 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Casp1P29452 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp1P29452 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp1P29452 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp1P29452 Gm25990-201ENSMUST00000102440 86 ntBASIC19.56■□□□□ 0.72
Casp1P29452 Gm4459-201ENSMUST00000118750 468 ntBASIC19.56■□□□□ 0.72
Casp1P29452 Gm1401-201ENSMUST00000122048 772 ntBASIC19.56■□□□□ 0.72
Casp1P29452 Gm15173-201ENSMUST00000122049 433 ntBASIC19.56■□□□□ 0.72
Casp1P29452 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Casp1P29452 Gm4535-201ENSMUST00000182274 558 ntBASIC19.56■□□□□ 0.72
Casp1P29452 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.56■□□□□ 0.72
Casp1P29452 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Casp1P29452 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.56■□□□□ 0.72
Casp1P29452 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.56■□□□□ 0.72
Casp1P29452 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp1P29452 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.56■□□□□ 0.72
Casp1P29452 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp1P29452 Gm5867-201ENSMUST00000063197 592 ntBASIC19.56■□□□□ 0.72
Casp1P29452 Gm10355-201ENSMUST00000097146 517 ntBASIC19.56■□□□□ 0.72
Casp1P29452 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp1P29452 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp1P29452 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Casp1P29452 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp1P29452 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp1P29452 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp1P29452 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Casp1P29452 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Casp1P29452 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Casp1P29452 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp1P29452 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casp1P29452 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp1P29452 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casp1P29452 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casp1P29452 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.55■□□□□ 0.72
Casp1P29452 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp1P29452 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Casp1P29452 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.55■□□□□ 0.72
Casp1P29452 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.55■□□□□ 0.72
Casp1P29452 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC19.55■□□□□ 0.72
Casp1P29452 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp1P29452 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp1P29452 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Casp1P29452 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Casp1P29452 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casp1P29452 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.54■□□□□ 0.72
Casp1P29452 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casp1P29452 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casp1P29452 Gm8097-201ENSMUST00000117903 829 ntBASIC19.54■□□□□ 0.72
Casp1P29452 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Casp1P29452 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Casp1P29452 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casp1P29452 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casp1P29452 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casp1P29452 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Casp1P29452 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Casp1P29452 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Casp1P29452 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms