Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp3P28862 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Mmp3P28862 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp3P28862 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Mmp3P28862 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp3P28862 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Mmp3P28862 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.44■□□□□ 0.38
Mmp3P28862 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp3P28862 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp3P28862 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp3P28862 Gm4459-201ENSMUST00000118750 468 ntBASIC17.44■□□□□ 0.38
Mmp3P28862 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp3P28862 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp3P28862 Gm4535-201ENSMUST00000182274 558 ntBASIC17.44■□□□□ 0.38
Mmp3P28862 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.44■□□□□ 0.38
Mmp3P28862 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.44■□□□□ 0.38
Mmp3P28862 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.44■□□□□ 0.38
Mmp3P28862 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp3P28862 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp3P28862 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp3P28862 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Mmp3P28862 Gm10355-201ENSMUST00000097146 517 ntBASIC17.44■□□□□ 0.38
Mmp3P28862 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp3P28862 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.44■□□□□ 0.38
Mmp3P28862 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Mmp3P28862 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.44■□□□□ 0.38
Mmp3P28862 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp3P28862 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp3P28862 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Mmp3P28862 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp3P28862 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Mmp3P28862 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Mmp3P28862 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp3P28862 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.43■□□□□ 0.38
Mmp3P28862 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp3P28862 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp3P28862 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp3P28862 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp3P28862 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp3P28862 Gm13418-201ENSMUST00000119097 944 ntBASIC17.43■□□□□ 0.38
Mmp3P28862 Gm12497-201ENSMUST00000138778 237 ntBASIC17.43■□□□□ 0.38
Mmp3P28862 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp3P28862 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp3P28862 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp3P28862 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Mmp3P28862 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp3P28862 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp3P28862 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.42■□□□□ 0.38
Mmp3P28862 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp3P28862 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp3P28862 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Mmp3P28862 Gm25990-201ENSMUST00000102440 86 ntBASIC17.42■□□□□ 0.38
Mmp3P28862 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Mmp3P28862 Gm25406-201ENSMUST00000157599 105 ntBASIC17.42■□□□□ 0.38
Mmp3P28862 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Mmp3P28862 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp3P28862 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Mmp3P28862 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp3P28862 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp3P28862 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.42■□□□□ 0.38
Mmp3P28862 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.42■□□□□ 0.38
Mmp3P28862 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.41■□□□□ 0.38
Mmp3P28862 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Mmp3P28862 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.41■□□□□ 0.38
Mmp3P28862 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.41■□□□□ 0.38
Mmp3P28862 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Mmp3P28862 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp3P28862 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp3P28862 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Mmp3P28862 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp3P28862 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Mmp3P28862 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.4■□□□□ 0.38
Mmp3P28862 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp3P28862 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp3P28862 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Mmp3P28862 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp3P28862 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.4■□□□□ 0.38
Mmp3P28862 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp3P28862 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp3P28862 Gm8097-201ENSMUST00000117903 829 ntBASIC17.4■□□□□ 0.38
Mmp3P28862 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.4■□□□□ 0.38
Mmp3P28862 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms