Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RxrbP28704 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RxrbP28704 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RxrbP28704 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.42■□□□□ 0.22
RxrbP28704 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RxrbP28704 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RxrbP28704 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RxrbP28704 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RxrbP28704 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RxrbP28704 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RxrbP28704 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RxrbP28704 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RxrbP28704 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.42■□□□□ 0.22
RxrbP28704 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RxrbP28704 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
RxrbP28704 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RxrbP28704 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RxrbP28704 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RxrbP28704 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RxrbP28704 Gm20760-201ENSMUST00000179197 648 ntBASIC16.41■□□□□ 0.22
RxrbP28704 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.41■□□□□ 0.22
RxrbP28704 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RxrbP28704 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
RxrbP28704 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RxrbP28704 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RxrbP28704 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RxrbP28704 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RxrbP28704 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RxrbP28704 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RxrbP28704 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RxrbP28704 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RxrbP28704 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RxrbP28704 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RxrbP28704 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.4■□□□□ 0.22
RxrbP28704 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RxrbP28704 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.4■□□□□ 0.22
RxrbP28704 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.4■□□□□ 0.22
RxrbP28704 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RxrbP28704 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
RxrbP28704 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RxrbP28704 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.39■□□□□ 0.22
RxrbP28704 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RxrbP28704 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RxrbP28704 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RxrbP28704 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RxrbP28704 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RxrbP28704 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RxrbP28704 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RxrbP28704 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RxrbP28704 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RxrbP28704 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RxrbP28704 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RxrbP28704 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RxrbP28704 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RxrbP28704 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RxrbP28704 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RxrbP28704 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RxrbP28704 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.39■□□□□ 0.21
RxrbP28704 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RxrbP28704 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RxrbP28704 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.38■□□□□ 0.21
RxrbP28704 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RxrbP28704 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RxrbP28704 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.38■□□□□ 0.21
RxrbP28704 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RxrbP28704 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RxrbP28704 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RxrbP28704 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RxrbP28704 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RxrbP28704 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.38■□□□□ 0.21
RxrbP28704 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.38■□□□□ 0.21
RxrbP28704 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.38■□□□□ 0.21
RxrbP28704 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.38■□□□□ 0.21
RxrbP28704 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RxrbP28704 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RxrbP28704 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RxrbP28704 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms